Back

Cell Structure and Function

● Japan Society for Cell Biology

Preprints posted in the last 90 days, ranked by how well they match Cell Structure and Function's content profile, based on 11 papers previously published here. The average preprint has a 0.01% match score for this journal, so anything above that is already an above-average fit.

1
Identification of the Down syndrome critical region 3 gene as a mammalian cell size regulator

Kimura, K.; Souda, M.; Mori, R.; Kato, Y.; Kurahashi, H.; Asai, M.; YAMAMOTO, K.

2026-07-24 cell biology 10.64898/2026.07.23.740440 medRxiv
Top 0.1%
1.0%
Show abstract

Using a genetic screening approach based on an inducible gene-activating system and cell sorting, Down syndrome critical region 3 (DSCR3) was isolated as a gene whose overexpression increased cell size. Fibroblasts derived from individuals with Down syndrome (DS) exhibit elevated DSCR3 expression at both the mRNA and protein levels, correlating with increased cell volume compared to fibroblasts from healthy donors. Despite a slower proliferation rate, DS fibroblasts demonstrate higher basal and maximal mitochondrial respiration, suggesting enhanced metabolic activity associated with increased cell size. siRNA-mediated knockdown of DSCR3 reduces cell size in both DS and normal fibroblasts, indicating its general role in cell size regulation. As DSCR3 is a component of the retriever complex involved in endosomal cargo recycling, these findings position membrane protein trafficking as a novel module for cell size control.

2
First molecular evidence that perialgal vacuole membrane maturation is temporally regulated during establishment of Chlorella variabilis photoendosymbiosis in Paramecium tritobursaria

Kodama, Y.; Fujishima, M.

2026-08-19 cell biology 10.64898/2026.08.14.744893 medRxiv
Top 0.2%
0.6%
Show abstract

Photoendosymbiosis between the ciliate Paramecium tritobursaria and the green alga Chlorella variabilis provides a model for understanding stable photoendosymbiosis. A defining feature of this association is the perialgal vacuole (PV) membrane, a host-derived membrane that encloses each alga and prevents its digestion. However, the timing of PV membrane maturation remains poorly understood because of the lack of molecular markers to distinguish between immature and mature PV membranes. Previous studies have shown that the establishment of symbiosis proceeds through multiple regulated steps following algal uptake; however, the molecular maturation of the PV membrane has not been directly examined. Here, we report a monoclonal antibody that specifically recognizes the PV membrane in symbiotic P. tritobursaria. Time-course immunofluorescence analysis showed that the PV membrane antigen was absent in the early stages after algal uptake, appeared at 48 h, and was detected in all PV membranes by 72 h. The antigen persisted before and after synchronous PV swelling, an experimentally inducible state associated with the loss of normal PV membrane function, but was absent from the membranes surrounding the digested algae. Our findings provide the first molecular evidence that PV membrane maturation is a temporally regulated checkpoint during the establishment of photoendosymbiosis.

3
Tag-stabilized fluorescent protein binders for endogenous cell type-specific protein labelling

Schnider, S. T.; Kring, C.; Maggi, L.; Vigano, A. M.; Affolter, M.; Aguilar, G.; Kempf, A.

2026-09-29 cell biology 10.64898/2026.09.29.754891 medRxiv
Top 0.2%
0.6%
Show abstract

Protein labelling using genetically encoded fluorescent protein fusions has revolutionized the study of protein localization and function. However, visualizing endogenous proteins in specific cell types remains challenging, as existing approaches often require overexpression or laborious genetic engineering. To address these limitations, we developed a library of fluorescent protein binders using existing nanobodies and single-chain variable fragments that recognize fluorescent proteins and short peptide tags, allowing for modular, cell type-specific labelling of genetically tagged endogenous proteins. We found that fluorescent protein binders generate background fluorescence in the absence of the target protein, reducing signal specificity. To overcome this limitation, we generated destabilized fluorescent protein binders directed against GFP, ALFA, GCN4 peptide and V5. These binders display increased antigen-dependent stability and reduced background fluorescence, thereby improving the signal-to-noise ratio of endogenous protein visualization. We demonstrate the detection of endogenous proteins in drosophila larvae and embryos, zebrafish embryos, as well as in specific neuronal populations of the adult drosophila brain. In the brain, tissue-specific labelling revealed previously unknown protein expression and subcellular localization in sleep-regulatory neurons. Together, our panel of tag-stabilized fluorescent protein binders provides a versatile, ready-to-use toolkit for background-free, cell type-specific visualization of endogenous proteins.

4
A triple fluorescent marker for live imaging of plant cell morphogenesis

Bomsel, Z.; Goncalves, C.; Ducamp, A.; Caillat-Miousse, L.; Dalmais, B.; Belcram, K.; Kodera, C.; Goldy, C.; Lionnet, C.; Moulin, S.; Caillaud, M.-C.; Bouchez, D.; Pastuglia, M.; Uyttewaal, M.

2026-08-21 plant biology 10.64898/2026.08.20.745988 medRxiv
Top 0.2%
0.5%
Show abstract

Live imaging of plant subcellular structures is key to deciphering the spatiotemporal bases of cellular processes, and their functional impact on growth and morphogenesis at various biological scales. Live imaging of plant cells essentially relies on expression of fluorescent markers labeling cells or subcellular structures of interest. Simultaneous multi-channel imaging of several markers is still not routine practice in plant cell biology, owing to issues linked to genetic or spectral compatibility of markers, differences in expression levels, silencing, toxicity, etc. Here we designed a three-color marker in Arabidopsis thaliana and Capsella rubella, enabling high-resolution live imaging of plant morphogenesis, including labeling of the cell membrane, the nucleus and the microtubule cytoskeleton. Detection of MT arrays involved the development of a MAP4-MBD-based microtubule marker optimized for plant cells. The three-color marker allows visualization of the three-dimensional organization and dynamics of plant microtubules within the intracellular space with unprecedented precision, in various organs including the root and shoot meristems, the leaf, anther, and gynoecium. Our results demonstrate the potential of such single-construct strategy for cell biology studies in plants.

5
Cellular integration of surface and nutrient signals during the early stage of filamentous growth in Saccharomyces cerevisiae

Pandey, S.; Louvet, M.; Kim, H.; Studer, D.; Borgeat, V.; Vincenzetti, V.; Dusserre, Y.; Delarue, M.; Pelet, S.

2026-09-03 cell biology 10.64898/2026.09.02.748872 medRxiv
Top 0.2%
0.5%
Show abstract

Budding yeast cells can transition from vegetative to filamentous growth under specific environmental stimuli. Saccharomyces cerevisiae has served as a model to understand this process, which is linked to the virulence of many fungal pathogens. One manifestation of filamentation in S. cerevisiae is the formation of pseudohyphal cells, which are elongated and divide in a polarized manner. Here, we established a live-cell imaging assay to monitor this morphogenetic transition and developed a set of fluorescent expression reporters to probe the activity of various signaling pathways during the first 10 hours of this transition. This approach allowed us to identify the stimulus that activates the filamentous growth Mitogen-Activated Protein Kinase (fgMAPK) pathway, which has long evaded identification. Our results indicate that the fgMAPK cascade senses mechanical cues and becomes activated when cells grow on a solid surface. In addition, we have observed that the stimulation of the transcription factor Gln3 regulated by the TOR pathway in low ammonium condition correlates with the elongation of the cells.

6
Identification and functional analysis of αKNL2 genes in cowpea

Kochevenko, A.; Amasende-Morales, I.; Leon-Martinez, G.; Lua, J.; Ruiz-Maciel, O.; Fuchs, J.; Vielle-Calzada, J.-P.; Houben, A.

2026-07-30 genetics 10.64898/2026.07.27.740913 medRxiv
Top 0.2%
0.5%
Show abstract

Although the KINETOCHORE NULL2 (KNL2) protein is an essential inner centromeri c protein that is crucially important for assembly and functioning of kinetochores, our understanding of its organization, dynamics and function of distinct isoforms in the cells of plant species undergoing mitosis/meiosis is far from complete. In this study, we identified and characterized two KNL2.1/KNL2.2 genes in cowpea. GUS reporter constructs and qRT-PCR revealed that the expression profiles of both genes were variable across organs, with the highest expression in leaves and roots. Using an EYFP gene fusion coupled with immunostaining, it was demonstrated that both KNL2 variants colocalized at centromeres in a cell-cycle-dependent manner. The CRISPR/Cas9 technique was used to generate various in-frame deletion and out-of-frame knock-out knl2 mutants. Single- and double-gene knock-out mutants were generated, and the effects of mutations on plant development and seed setting were analyzed. The results are discussed both with respect to the roles of these proteins in kinetochore assembly and in the context of using KNL2 genes for in vivo production of haploids in cowpea. Significance statementThis study identifies two paralogous KNL2 genes in cowpea and reveals their functional redundancy during centromere assembly and essential role in seed development. These findings expand our knowledge of kinetochore dynamics and provide a basis for exploring the evolutionary diversification of centromeric proteins in legumes.

7
Auxin-inducible degron-mediated protein depletion in Diplonema papillatum

Clifford, G.; Akiyoshi, B.

2026-09-14 cell biology 10.64898/2026.09.11.751042 medRxiv
Top 0.2%
0.5%
Show abstract

Diplonemids are highly abundant unicellular flagellates that are evolutionarily divergent from traditional model eukaryotes. Diplonema papillatum is a model diplonemid for which several molecular tools have recently been established. However, no method for conditional protein depletion was available. Here, we have adapted an auxin-inducible degron (AID) system in D. papillatum. Depletion of the KIN-A motor protein (a glycomonad-specific component of the chromosomal passenger complex) causes defects in chromosome segregation and cell proliferation. The AID system also successfully depleted a divergent Mad1 protein that localizes at nuclear pores, and a flagellar component, CFAP20. Our study demonstrates the power of the AID system to perform loss-of-function studies in D. papillatum.

8
Generation of a transgenic cephalopod

Montague, T. G.; Gibbons, C. J.; Barlow, G. T.; Bashkirova, E. V.; Xu, Y.; Castagna, E. C.; Mungioli, T. J.; Patrick, K. A.; Nemes, A.; Varma, A.; Looger, L. L.; Albertin, C. B.; Lomvardas, S.; Axel, R.

2026-09-28 genetics 10.64898/2026.09.23.753964 medRxiv
Top 0.3%
0.4%
Show abstract

Coleoid cephalopods (cuttlefish, octopus, and squid) are marine mollusks with elaborate nervous systems that support a diverse repertoire of complex behaviors. These include the neural control of the color, pattern, and texture of the skin, facilitating both adaptive camouflage and innate patterning that may reflect internal state. The development of transgenic cephalopods expressing fluorescent proteins, optogenetic actuators, and reporters of neural activity would contribute a new and important technology to cephalopod biology. The generation of transgenic cephalopods, however, has remained a major challenge. Here, we report the development of stable transgenic dwarf cuttlefish (Ascarosepion bandense) expressing ubiquitous nuclear-localized mScarlet, a red fluorescent protein. We evaluated multiple strategies for transgenesis, and established cuttlefish lines using both CRISPR and the transposons Sleeping Beauty and Minos. The stable expression of transgenes enabled live imaging of cell dynamics during embryonic development. The Minos transposon emerged as the most efficient transgenesis strategy and is adaptable to promoters and transgenes of choice. These strategies now enable the generation of diverse genetic tools for mechanistic studies of cephalopod biology.

9
RASAL3 regulates RAC/CDC42 GTPases, SAPK/JNK signaling, IL-2 gene activity, and directed motility in human T cells

Varadinkova, S.; Oslacky, P.; Cada, S.; Kvasnickova, K.; Cigankova, P.; Gottumukkala, N. V.; Schraven, B.; Lindquist, J. A.; Smida, M.

2026-07-27 cell biology 10.64898/2026.07.24.740537 medRxiv
Top 0.4%
0.3%
Show abstract

RASAL3 acts as a negative regulator of small cellular GTPases in hematopoietic cells. In immune cells, it primarily modulates the RAS/MAPK signaling pathway and affects cellular events including proliferation, differentiation, survival, and migration. Due to its inhibitory role in T cells, RASAL3 may represent a potential modulatory target for improving therapeutic strategies such as cell-based immunotherapy. However, most existing knowledge about RASAL3 function is derived from murine models, and its role in human T-cell signaling remains insufficiently characterized. To address this gap, we systematically investigated the function of RASAL3 in human primary T cells and T-cell line. For this purpose, we employed RASAL3 overexpression, CRISPR/Cas9-mediated deletion, and siRNA-mediated knockdown to thoroughly analyze the effects of RASAL3 on T-cell signaling, proliferation, and migration. Our data demonstrate that RASAL3 modulates primarily CDC42 and RAC1/RAC2 GTPases activity, SAPK/JNK phosphorylation, c-Fos and c-Jun expression, and IL-2 gene promoter activation. In addition, RASAL3 regulates actin polymerization and T-cell migration. Notably, loss of RASAL3 increases Jurkat T cells motility in vivo and potentiates their homing to the spleen. Collectively, these findings identify RASAL3 as an important regulator of human T-cell activation and motility and highlight its application potential for improving CAR-T cell therapy.

10
Axin2L regulates planar cell polarity in Xenopus embryos

Velayudhan, S. S.; Itoh, K.; Sokol, S.

2026-07-30 cell biology 10.64898/2026.07.29.741488 medRxiv
Top 0.4%
0.3%
Show abstract

Axin proteins function as central scaffolds of the {beta}-catenin destruction complex in the Wnt/{beta}-catenin pathway that has been considered distinct from the planar cell polarity (PCP) pathway. Here, we show that dorsal expression of mutated Axin2L, a predominant Axin homolog in Xenopus early embryos, disrupts convergent extension movements and neural tube closure in a manner reminiscent of the mutations in vertebrate PCP genes. GFP-Axin2L becomes planar polarized in the epidermal cells adjacent to the folding neural plate and those surrounding a wound. Axin2L associated and colocalized with ADIP, a similarly polarized protein that is essential for neural tube morphogenesis and embryonic wound healing. Interference with Axin2L function abrogated Vangl2 accumulation at the anterior sides of neuroepithelial cells and impaired ciliogenesis in the gastrocoel roof plate. We propose that, in addition to the canonical Wnt pathway, Axin2L controls PCP signaling during vertebrate morphogenesis.

11
Novel protein networks in motile cilia from human epithelial cells revealed by cryo-ET and proteomics analysis of cilia from PCD patients

de Ceuninck van Capelle, C.; Cairoli, T.; Afanasyev, P.; Li, Y.; Markovic, E.; Jud, A.; Leitner, A.; Muller, L.; Ishikawa, T.

2026-09-29 cell biology 10.64898/2026.09.28.755144 medRxiv
Top 0.5%
0.2%
Show abstract

In our past study on human cilia from primary ciliary dyskinesia (PCD) patients using cryo-electron tomography and mass spectrometry, defects in the DNAH5 gene were proven to cause the loss of the entire outer dynein arm along with other proteins. This phenomenon was not observed in the unicellular green alga Chlamydomonas. In this study, we examined the loss of ciliary components caused by defects in various genes, based on proteomic and structural analyses of motile cilia from multiple PCD patients. The absence of single outer arm dynein genes causes a loss or significant decrease in other inner and outer arm dyneins. Interestingly, some patients with outer dynein defects show decreased intraflagellar transport (IFT) proteins, suggesting an influence of cargo components or assembly on transport. These phenomena were not observed in Chlamydomonas, suggesting a more complex mechanism of ciliogenesis in humans despite the high similarity in the final 3D architecture of the 9+2 axoneme. Defects in certain central pair proteins unexpectedly reduced components on the doublets as well. Our results demonstrate protein-protein interactions during stages of human motile ciliogenesis that are more complex than those in unicellular organisms.

12
JEV helicase targets host MTOC and participates in the organization of pericentriolar viroplasm

Amita, H.; Dudhe, P.; Yadav, M.; Basu, B.; Vrati, S.; Dhanasekaran, K.

2026-07-24 cell biology 10.64898/2026.07.23.740276 medRxiv
Top 0.5%
0.2%
Show abstract

Flaviviruses contribute significantly to the global disease burden and are known to remodel host organelles extensively to their advantage. Centrosomal microtubule-organizing centres (MTOCs) having established role in cell division and signalling are also targeted by viruses. However, it remains uncertain whether they act as bystanders or actively engage in viral processes. Here, we elucidate the centrosome and cytoskeletal involvement during Japanese Encephalitis Virus (JEV) infection. Virus-free expression studies have identified a centrosome-targeting region within the C-terminal helicase domain that mediates the association of virus-derived structures with host MTOCs. When expressed exogenously, JEV-NS3 formed pericentriolar aggresomes resembling the distribution pattern of helicase-containing viroplasm in infected cells. Centriole depletion assays revealed the proviral role of centrosome facilitating JEV replication, where the viroplasm organization depends on centrosomal MTOCs, and vimentin cages. Additionally, microtubule disruption and dynarrestin blockade assays emphasized the roles of microtubules and dynein in concentrating NS3-containing vesicular packets towards centrosomes, highlighting the centrosome-cytoskeleton axis as a potential target for flaviviral intervention. SummaryThis study demonstrates that JEV helicase is directed to centrosomes via its CTHD domain, using them to initiate pericentriolar viroplasm formation. It also highlights the unappreciated function of centrosomes as a proviral hub, orchestrating cytoskeletal remodelling and viral factory organization. Graphical abstractJEV helicase is targeted to centrosomes to form viroplasm with the aid of microtubule and motor proteins. A) JEV lifecycle from receptor binding (Step 1) to endocytic internalization (Step 2) followed by uncoating and release of viral genome (Step 3) followed by replication within the ER derived Vesicular packets (Step 4). This vesicle packets harbors viral proteins that form replication complex, like helicase and replicase and the replicative intermediate, dsRNA. These vesicle packets with the aid of retrograde motor protein gets targeted towards the centrosome (Step 5). Ultimately multiple vesicle packets accumulate in the pericentrosomal region, where it forms a separate compartment enclosed by vimentin and tubulin cage (Step 6). Inset A, B and C depict the effect of cytoskeletal perturbations on Viroplasm formation. B) Disruption of microtubules using Nocodazole completely abolishes pericentriolar viroplasm organization. C) Centrinone mediated centrosome depletion markedly reduces both the number and size of pericentriolar viroplasm. D) Dynarrestin mediated retrograde microtubule transport significantly decreases the reorganization of vesicle packets to form the viroplasm in the pericentriolar region. O_FIG O_LINKSMALLFIG WIDTH=198 HEIGHT=200 SRC="FIGDIR/small/740276v1_ufig1.gif" ALT="Figure 1"> View larger version (56K): org.highwire.dtl.DTLVardef@17a6354org.highwire.dtl.DTLVardef@f208eorg.highwire.dtl.DTLVardef@1224fcaorg.highwire.dtl.DTLVardef@1a48bab_HPS_FORMAT_FIGEXP M_FIG C_FIG

13
Mechanosensing activates flashing Ca2+ dynamics associated with cell regeneration in Physcomitrium patens

Wang, H.-A.; Yen, Y.-C.; Tang, H.

2026-07-28 cell biology 10.64898/2026.07.26.740844 medRxiv
Top 0.5%
0.2%
Show abstract

Mechanical wounding is the primary trigger for various forms of plant regeneration; however, the mechanism by which mechanical cues are rapidly translated into regenerative cell fate decisions remains elusive. Here, using live-cell imaging in Physcomitrium patens, we established a spatiotemporal framework of Ca2+ signaling that bridges initial wound perception and cellular reprogramming. We demonstrate that wounding induces a primary Ca2+ wave followed by two forms of secondary responses, including a unique stochastic flashing signature that persists for hours and restricts in wound-neighbor cells. Wound-induced membrane deformation was associated with the activation of Ca2+ influx. In addition, osmotic stress-induced membrane tension also elicited a rapid Ca2+ spike followed by broadly flashing signals without spatial specificity. Pharmacological blockade of plasma membrane Ca2+ channels and chelation of extracellular Ca2+ significantly reduced both primary and secondary Ca2+ responses, indicating that these wound-induced Ca2+ dynamics mainly rely on regulated influx rather than passive diffusion. Inhibition of Ca2+ signaling also disrupted mechanosensitive F-actin reorganization and suppressed cell reprogramming, resulting in a severe reduction in regeneration capacity. Together, our results demonstrate a complex spatiotemporal Ca2+ code that precedes cytoskeletal reorganization and cell reprogramming in wound-neighbor cells, providing new insights into plant tissue regeneration. HighlightMechanical stress triggers a rapid Ca2+ influx followed by a prolonged flash signaling, revealing a spatiotemporal framework of Ca2+ dynamics that links membrane tension to coordinated plant regeneration.

14
A naturally occurring frameshift mutation in the UNUSUAL FLORAL ORGANS gene associated with the marimo floral phenotype in gerbera

Hattori, T.; Shimada, R.; Nagakura, M.; Ando, R.; Isobe, S.; Tajima, N.; Hirakawa, H.; Shirasawa, K.; Tominaga, A.

2026-08-14 genetics 10.64898/2026.08.09.743735 medRxiv
Top 0.5%
0.2%
Show abstract

BackgroundThe capitulum of Asteraceae is a highly specialized inflorescence whose formation requires the coordinated regulation of multiple developmental processes, including floral organ identity and floral meristem determinacy. The LEAFY (LFY)-UNUSUAL FLORAL ORGANS (UFO) regulatory module is known to play an important role in flower development; however, naturally occurring mutations affecting this pathway have not been genetically characterized in gerbera (Gerbera hybrida). ResultsIn this study, we characterized a novel gerbera mutant identified during a commercial crossing program and named it marimo based on its green, spherical capitulum. Morphological observations revealed the repeated formation of secondary and tertiary floret-like organs within primary floret-like organs. Scanning electron microscopy showed that the epidermal structure of the green organs in marimo was similar to that of wild-type involucral bracts. RNA sequencing identified numerous differentially expressed genes between marimo and the wild type, and network and Gene Ontology analyses highlighted gene groups associated with flower development, reproductive organ differentiation, and tissue structure formation. RNA-seq analysis showed increased expression of LFY and reduced expression of GGLO1, a PISTILLATA/GLOBOSA-like B-class MADS-box gene, in the marimo mutant. RT-qPCR analysis of a segregating population further confirmed reduced GGLO1 expression in marimo-type individuals. In addition, a single-nucleotide deletion was identified in the coding region of UFO. This deletion was predicted to cause a frameshift and a premature stop codon. In selfed progeny of No. 251, the UFO genotype was fully associated with capitulum phenotype, and only individuals homozygous for the mutant allele exhibited the marimo phenotype. ConclusionsThese results indicate that the naturally occurring frameshift mutation in UFO is the strongest candidate variant underlying the marimo phenotype. RNA-seq analysis showed increased LFY expression and markedly reduced GGLO1 expression in the marimo mutant. Reduced activity of the LFY-UFO regulatory module may therefore have altered the expression of GGLO1 and other floral organ development-related genes despite the continued expression of LFY. These changes may have affected both floral organ identity and floral meristem determinacy, resulting in the formation of green involucral bract-like organs and the repeated production of floret-like organs. The marimo mutant provides a useful genetic resource for investigating capitulum development in Asteraceae and may also serve as breeding material for introducing novel ornamental traits into gerbera.

15
A genetically encoded RhoG FRET biosensor reveals spatially compartmentalized RhoG-Rac1 signaling during cell protrusion

de Assis Lima, M.; Thomas, A.; Ravishankar, R.; Garcia-Mata, R.; Danuser, G.; Miskolci, V.; Cox, D.; Hodgson, L.

2026-08-25 cell biology 10.64898/2026.08.24.746776 medRxiv
Top 0.5%
0.2%
Show abstract

RhoG is a member of the Rho-family of small GTPases, and is closely related to the canonical Rac1 GTPase, implicated in membrane trafficking, dorsal ruffling, macropinocytosis, and cell protrusion, but its activity has been difficult to visualize directly in living cells with high spatial and temporal resolution. Here, we developed and validated a genetically encoded, single-chain Forster resonance energy transfer (FRET) biosensor for RhoG based on a C-terminal full-length RhoG and an intramolecular RhoG-binding domain derived from ELMO1. The biosensor showed a robust dynamic range when comparing constitutively active and inactive RhoG mutants, responded appropriately to regulation by RhoGDI, GAPs, and GEFs, and detected growth factor-stimulated RhoG activation in live cells. Imaging in mouse embryonic fibroblasts revealed dynamic RhoG activation at leading-edge protrusions, dorsal ruffles, and forming pinocytic and macropinocytic structures. To define the signaling relationship between RhoG and its closely related family member Rac1, we combined the RhoG biosensor with a near-infrared Rac1 FRET biosensor for simultaneous live-cell imaging. Morphodynamic mapping showed that both RhoG and Rac1 activities were positively coupled to edge protrusion, with strongest correlations near the leading-edge, but their direct coupling varied with distance from the edge, indicating partial spatial decoupling within protrusive regions. Inhibition of Src-family kinases altered RhoG dynamics, strongly suppressed Rac1 coupling to protrusion, and inverted the normal positive correlation between RhoG and Rac1 activities. Signaling microdomain analysis further showed that Src inhibition selectively prolonged Rac1 microdomain lifetimes without significantly affecting RhoG domains. Together, these results establish a new biosensor for direct visualization of RhoG activity and reveal that RhoG and Rac1 are coordinated but spatially and temporally distinct components of protrusion-associated signaling networks, with Src-family kinases playing a central role in maintaining their normal coupling.

16
Alcama expressed in blood retina barrier and Muller glia is involved in zebrafish retina regeneration

Thomas Michael, S.; Allan, K.; Rini, M.; DiCicco, R.; Ramos, M.; Yuan, A.

2026-08-25 cell biology 10.64898/2026.08.24.746827 medRxiv
Top 0.6%
0.2%
Show abstract

Activated leukocyte cell adhesion molecule A (Alcama) plays a role in axonal guidance, cell differentiation, and retinal lamination in a developing retina and was identified as a marker for activated Muller glial cells in adult zebrafish. However, its spatiotemporal localization and its involvement in retina regeneration remains unclear. Here we induced focal photoreceptor damage in zebrafish using laser photocoagulation and examined the expression and localization of Alcama at different time points post lesion. Immunohistochemistry in wild type fish and Tg(kdrl-EGFP) fish showed Alcama localized to the blood retina barrier with increased expression in Muller glial end feet and radial processes in a regenerating retina. To confirm its role in retina regeneration, alcama expression was transiently knocked down using morpholinos in adult fish. Scanning laser ophthalmoscopy, Zpr1 immunostaining and EdU staining showed delayed retina regeneration in alcama knockdown fish, indicating a possible role for Alcama in zebrafish retina regeneration.

17
Midbody inheritance predicts re-entry into quiescence, but not lineage potential, in mouse hematopoietic stem cells

Fukushima, T.; Wehling, A.; Shimamoto, R.; Asada, S.; Kawamura, S.; Fukuyama, T.; Goyama, S.; Schroeder, T.; Kitamura, T.; Tanaka, Y.

2026-07-29 cell biology 10.64898/2026.07.28.739739 medRxiv
Top 0.6%
0.2%
Show abstract

Hematopoietic stem cells (HSCs) give rise to all blood cell lineages and possess long-term self-renewal potential. HSCs undergo symmetric division for their expansion and asymmetric division to generate one HSCs and one progenitor cells which contribute to production of mature blood cells. The midbody is a structure which is formed in the center of the intercellular bridge during cytokinesis. However, the midbody is either asymmetrically inherited by one daughter cell or symmetrically released after cell division, whether these distinct patterns of midbody inheritance influence HSC fate remain poorly understood. In this study, we designed a fusion protein hmKO2 and MgcRacGAP which is a component of midbody. We then traced the midbody inheritance during cell division and the future cell fates of HSC daughters after division by time-lapse imaging. As a result, we found that the midbody release correlated with the delay of the time to the next division but not to the lineage potential of HSCs, indicating the possibility that midbody remnant plays some roles in cell cycle progression. HighlightHematopoietic stem cells exhibit a low frequency of midbody inheritance. Midbody inheritance does not affect the lineage potential of daughter cells. Midbody loss is associated with delayed entry into the next cell cycle.

18
Adeno-Associated Virus Mediated Expression of Bcl-xL Attenuates Apoptosis in Fuchs Endothelial Corneal Dystrophy

Little, N.; Yan, J.; Dhupar, N.; Ong Tone, S.

2026-09-03 cell biology 10.64898/2026.09.01.748650 medRxiv
Top 0.6%
0.2%
Show abstract

Fuchs Endothelial Corneal Dystrophy (FECD) is characterized by progressive corneal endothelial cell loss and the formation of corneal guttae. Currently, there is a global shortage of donor corneas and new strategies are needed to reduce the need for corneal transplantation. While adeno-associated viruses (AAVs) have the capacity to deliver anti-apoptotic genes to human corneal endothelial cells (CECs), this has not been fully explored as a therapeutic strategy for FECD. In this study, we evaluated the transduction efficiency of self-complementary (sc-) and single-stranded (ss-) AAV2 serotypes in human CECs and ex vivo tissues and assessed whether AAV-mediated expression of Bcl-xL could attenuate apoptosis in FECD. Seventeen scAAV2 serotypes were screened for transduction efficiency in normal human CECs via green fluorescent protein (GFP) expression. The top 4 AAV2 serotypes were further evaluated in FECD cell lines, healthy cadaveric donor specimens, and FECD patient specimens. FECD cell lines were transduced with anti-apoptotic ssAAV2/5-Bcl-xL (AAV2/5-CAG-eGFP-P2A-BCLXL) and treated with etoposide to induce apoptosis. We found that scAAV2/5 demonstrated high transduction efficiency across all normal and FECD cell lines and tissues. We observed that ssAAV2/5-mediated expression of Bcl-xL provided significant protection against etoposide-induced apoptosis in FECD CECs (71.68%{+/-}0.69 vs 23.96%{+/-}8.88%, p=0.018). Our findings show that AAVs have the potential for therapeutic gene delivery to the human corneal endothelium, and that targeting the Bcl-xL mediated apoptotic pathway can be further explored as a therapeutic for FECD.

19
Neuropeptide T2A-GAL4 knock-ins illustrate practical considerations for interpreting GAL4 reporter patterns in Drosophila

Jinnai, K.; Ozawa, K.; Yajima, K.; Tanimoto, H.; Kondo, S.

2026-09-22 genetics 10.64898/2026.09.16.750837 medRxiv
Top 0.6%
0.1%
Show abstract

Transgenic GAL4 lines are widely used in Drosophila to label and manipulate specific cell types, but the resulting reporter expression patterns do not always represent ongoing driver activity. We generated a collection of neuropeptide T2A-GAL4 knock-ins and characterized their expression by native-fluorescence imaging using UAS-CD8::GFP and a Brp-miRFP680 knock-in, eliminating the need for immunostaining. During characterization of these lines, we observed cases in which adult GFP patterns did not match the on-going GAL4 activity, as well as cases in which GAL4 produced adverse cellular effects. Using temperature-sensitive GAL80, we found that adult GFP expression in certain neurons driven by CCHa2-T2A-GAL4 and Dsk-T2A-GAL4 depended on GAL4 activity before eclosion and was not reproduced by adult-only induction. Several GAL4 lines also showed dominant developmental phenotypes. Heterozygous Burs-T2A-GAL4 animals, for example, displayed wing-expansion defects that were fully suppressed by GAL80. Severe wing defects were not accompanied by a reduction in the number of reporter-labeled neurons before eclosion, but the morphology of these neurons were affected. These observations illustrate how developmental driver history and GAL4-associated cellular effects can influence reporter patterns in the adult nervous system.

20
Optogenetic Control of cAMP Levels and HCN Channels: Implications in Cardiac Physiology and Parkinsons Disease

Yang, R.-Z.; Wang, D.-D.; Liu, D.-H.; Liu, P.-P.; Li, S.-A.; Kang, J.-S.

2026-08-18 cell biology 10.64898/2026.08.13.744738 medRxiv
Top 0.6%
0.1%
Show abstract

Cyclic adenosine monophosphate (cAMP) is a second messenger that regulates various cellular processes, including the activity of hyperpolarization-activated channels (HCN), which are implicated in cardiac physiology and neurodegenerative diseases such as Parkinsons disease (PD). In this study, we used a photoactivated adenylyl cyclase (PAC) S27A mutant to optogenetically control intracellular cAMP levels. We demonstrated that light-induced elevation of cAMP activated HCN4 channels, leading to increased beating rates in cardiomyocytes. Unilateral expression of PAC(S27A) in the substantia nigra pars compacta of mice induced rotation behavior upon light stimulation, which could be attenuated by HCN inhibitors. Furthermore, PAC(S27A) activation partially recovered motor deficits in a 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP)-induced PD mouse model, accompanied by increased HCN2 channel expression in ipsilateral basal ganglia. Our findings highlight the potential of using optogenetics to modulate cAMP and HCN channel activity for the treatment of cardiac and neurological disorders.